BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A01LP1|AL426294
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1524 1512 0.0
>3x_Contig1524
Length = 11623
Score = 1512 bits (760), Expect = 0.0
Identities = 764/768 (99%)
Strand = Plus / Minus
Query: 1 gatcagtactattttatcgttatggthactgtttgaacatgggtggcgaaacggcagatc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5137 gatcagtactattttatcgttatggtaactgtttgaacatgggtggcgaaacggcagatc 5078
Query: 61 actgggtttggggcgtgggtatctataccaccagtatcataattgtgttaggcaaggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5077 actgggtttggggcgtgggtatctataccaccagtatcataattgtgttaggcaaggctg 5018
Query: 121 cattaattacgagtcaatggacgaaatttacgttggtggctatacctggctctcttgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5017 cattaattacgagtcaatggacgaaatttacgttggtggctatacctggctctcttgtaa 4958
Query: 181 tatggctcttgtttttccctttctacagtgctgttttcccaagagttaatgtctccaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4957 tatggctcttgtttttccctttctacagtgctgttttcccaagagttaatgtctccaagg 4898
Query: 241 agtattatggtatcatcggccatgtttatggctcagcaaccttttggttgatgtgcatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4897 agtattatggtatcatcggccatgtttatggctcagcaaccttttggttgatgtgcatcg 4838
Query: 301 tattgccagtatttgctcttttgagagatttcgtatggaaatattataaaaggacgtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4837 tattgccagtatttgctcttttgagagatttcgtatggaaatattataaaaggacgtatt 4778
Query: 361 cacctgaatcatatcatgtcgttcaggaaatgcagaagtacaatatcagtgattacagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4777 cacctgaatcatatcatgtcgttcaggaaatgcagaagtacaatatcagtgattacagac 4718
Query: 421 ctagaatggaacaatttcaaaaggccataagamaggtcagacaggtgcmaagaatgaaaa 480
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 4717 ctagaatggaacaatttcaaaaggccataagaaaggtcagacaggtgcaaagaatgaaaa 4658
Query: 481 agcaaagaggttttgcattctcgcaaagcgaagagggtggacaagataggatcatcagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4657 agcaaagaggttttgcattctcgcaaagcgaagagggtggacaagataggatcatcagaa 4598
Query: 541 tgtatgataccacattaaagaggggtgtacatggtgaactggccgatgcatctctaaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4597 tgtatgataccacattaaagaggggtgtacatggtgaactggccgatgcatctctaaatc 4538
Query: 601 ccttcaatgatactccggctcaagtcgaaccctcttccaatgtgggtcttcgccaatcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4537 ccttcaatgatactccggctcaagtcgaaccctcttccaatgtgggtcttcgccaatcgt 4478
Query: 661 tcgaatccaccaatcctttcaaggatgtttgagtyaagaagtcagtaacgttgtaattat 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4477 tcgaatccaccaatcctttcaaggatgtttgagtcaagaagtcagtaacgttgtaattat 4418
Query: 721 gtatatagatgcgtacttagtagtttgaaaataatgttggtatttcag 768
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4417 gtatatagatgcgtacttagtagtttgaaaataatgttggtatttcag 4370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4771
Number of Sequences: 1807
Number of extensions: 4771
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)